Publications

2009
Lovley DR.  2009.  Future shock from the microbe electric.. Microb Biotechnol. 2(2):139-41.
Aklujkar M, Krushkal J, DiBartolo G, Lapidus A, Land ML, Lovley DR.  2009.  The genome sequence of Geobacter metallireducens: features of metabolism, physiology and regulation common and dissimilar to Geobacter sulfurreducens.. BMC Microbiol. 9:109.
Risso C, Sun J, Zhuang K, Mahadevan R, DeBoy R, Ismail W, Shrivastava S, Huot H, Kothari S, Daugherty S et al..  2009.  Genome-scale comparison and constraint-based metabolic reconstruction of the facultative anaerobic Fe(III)-reducer Rhodoferax ferrireducens.. BMC Genomics. 10:447.
Sun J, Sayyar B, Butler JE, Pharkya P, Fahland TR, Famili I, Schilling CH, Lovley DR, Mahadevan R.  2009.  Genome-scale constraint-based modeling of Geobacter metallireducens.. BMC Syst Biol. 3:15.
Leang C, Krushkal J, Ueki T, Puljic M, Sun J, Juárez K, Núñez C, Reguera G, DiDonato R, Postier B et al..  2009.  Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens.. BMC Genomics. 10:331.
Qu Y, Brown P, Barbe JF, Puljic M, Merino E, Adkins RM, Lovley DR, Krushkal J.  2009.  GSEL version 2, an online genome-wide query system of operon organization and regulatory sequence elements of Geobacter sulfurreducens.. OMICS. 13(5):439-49.
Sahu AK, Conneely T, Nüsslein K, Ergas SJ.  2009.  Hydrogenotrophic denitrification and perchlorate reduction in ion exchange brines using membrane biofilm reactors.. Biotechnol Bioeng. 104(3):483-91.
Colak S, Nelson CF, Nüsslein K, Tew GN.  2009.  Hydrophilic modifications of an amphiphilic polynorbornene and the effects on its hemolytic and antibacterial activity.. Biomacromolecules. 10(2):353-9.
Abd-Alla AMM, Vlak JM, Bergoin M, Maruniak JE, Parker A, Burand JP, Jehle JA, Boucias DG.  2009.  Hytrosaviridae: a proposal for classification and nomenclature of a new insect virus family.. Arch Virol. 154(6):909-18.
Mouser PJ, N'guessan LA, Elifantz H, Holmes DE, Williams KH, Wilkins MJ, Long PE, Lovley DR.  2009.  Influence of heterogeneous ammonium availability on bacterial community structure and the expression of nitrogen fixation and ammonium transporter genes during in situ bioremediation of uranium-contaminated groundwater.. Environ Sci Technol. 43(12):4386-92.
M Siegrist S, Unnikrishnan M, McConnell MJ, Borowsky M, Cheng T-Y, Siddiqi N, Fortune SM, D Moody B, Rubin EJ.  2009.  Mycobacterial Esx-3 is required for mycobactin-mediated iron acquisition.. Proc Natl Acad Sci U S A. 106(44):18792-7.
Webley WC, Tilahun Y, Lay K, Patel K, Stuart ES, Andrzejewski C, Salva PS.  2009.  Occurrence of Chlamydia trachomatis and Chlamydia pneumoniae in paediatric respiratory infections.. Eur Respir J. 33(2):360-7.
Rich SM, Leendertz FH, Xu G, LeBreton M, Djoko CF, Aminake MN, Takang EE, Diffo JLD, Pike BL, Rosenthal BM et al..  2009.  The origin of malignant malaria.. Proc Natl Acad Sci U S A. 106(35):14902-7.
M Siegrist S, Rubin EJ.  2009.  Phage transposon mutagenesis.. Methods Mol Biol. 465:311-23.
Juárez K, Kim B-C, Nevin K, Olvera L, Reguera G, Lovley DR, Methé BA.  2009.  PilR, a transcriptional regulator for pilin and other genes required for Fe(III) reduction in Geobacter sulfurreducens.. J Mol Microbiol Biotechnol. 16(3-4):146-58.
Hedrick DB, Peacock AD, Lovley DR, Woodard TL, Nevin KP, Long PE, White DC.  2009.  Polar lipid fatty acids, LPS-hydroxy fatty acids, and respiratory quinones of three Geobacter strains, and variation with electron acceptor.. J Ind Microbiol Biotechnol. 36(2):205-9.
Welch A, Drummond F, Tewari S, Averill A, Burand JP.  2009.  Presence and prevalence of viruses in local and migratory honeybees (Apis mellifera) in Massachusetts.. Appl Environ Microbiol. 75(24):7862-5.
Wilkins MJ, VerBerkmoes NC, Williams KH, Callister SJ, Mouser PJ, Elifantz H, N'guessan LA, Thomas BC, Nicora CD, Shah MB et al..  2009.  Proteogenomic monitoring of Geobacter physiology during stimulated uranium bioremediation.. Appl Environ Microbiol. 75(20):6591-9.
Martz E.  2009.  Proteopedia.Org: a scientific "Wiki" bridging the rift between 3D structure and function of biomacromolecules.. Biopolymers. 92(1):76-7.
Mouser PJ, Holmes DE, Perpetua LA, DiDonato R, Postier B, Liu A, Lovley DR.  2009.  Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation.. ISME J. 3(4):454-65.
Yi H, Nevin KP, Kim B-C, Franks AE, Klimes A, Tender LM, Lovley DR.  2009.  Selection of a variant of Geobacter sulfurreducens with enhanced capacity for current production in microbial fuel cells.. Biosens Bioelectron. 24(12):3498-503.
Deangelis KM, Brodie EL, DeSantis TZ, Andersen GL, Lindow SE, Firestone MK.  2009.  Selective progressive response of soil microbial community to wild oat roots.. ISME J. 3(2):168-78.
Handa N, Amitani I, Gumlaw N, Sandler SJ, Kowalczykowski SC.  2009.  Single molecule analysis of a red fluorescent RecA protein reveals a defect in nucleoprotein filament nucleation that relates to its reduced biological functions.. J Biol Chem. 284(28):18664-73.
Long JE, Renzette N, Sandler SJ.  2009.  Suppression of constitutive SOS expression by recA4162 (I298V) and recA4164 (L126V) requires UvrD and RecX in Escherichia coli K-12.. Mol Microbiol. 73(2):226-39.
Holmes DE, O'Neil RA, Chavan MA, N'guessan LA, Vrionis HA, Perpetua LA, Larrahondo JM, DiDonato R, Liu A, Lovley DR.  2009.  Transcriptome of Geobacter uraniireducens growing in uranium-contaminated subsurface sediments.. ISME J. 3(2):216-30.

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