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Zhuang K, Izallalen M, Mouser P, Richter H, Risso C, Mahadevan R, Lovley DR.  2011.  Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments.. ISME J. 5(2):305-16.
Zhao Z, Zhang Y, Holmes DE, Dang Y, Woodard TL, Nevin KP, Lovley DR.  2016.  Potential enhancement of direct interspecies electron transfer for syntrophic metabolism of propionate and butyrate with biochar in up-flow anaerobic sludge blanket reactors.. Bioresour Technol. 209:148-56.
Zhang T, Bain TS, Nevin KP, Barlett MA, Lovley DR.  2012.  Anaerobic benzene oxidation by Geobacter species.. Appl Environ Microbiol. 78(23):8304-10.
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Williams KH, Nevin KP, Franks A, Englert A, Long PE, Lovley DR.  2010.  Electrode-based approach for monitoring in situ microbial activity during subsurface bioremediation.. Environ Sci Technol. 44(1):47-54.
Williams KH, Wilkins MJ, A N'Guessan L, Arey B, Dodova E, Dohnalkova A, Holmes D, Lovley DR, Long PE.  2013.  Field evidence of selenium bioreduction in a uranium-contaminated aquifer.. Environ Microbiol Rep. 5(3):444-52.
Wilkins MJ, Wrighton KC, Nicora CD, Williams KH, McCue LAnn, Handley KM, Miller CS, Giloteaux L, Montgomery AP, Lovley DR et al..  2013.  Fluctuations in species-level protein expression occur during element and nutrient cycling in the subsurface.. PLoS One. 8(3):e57819.
Waldron PJ, Petsch ST, Martini AM, Nüsslein K, Nüslein K.  2007.  Salinity constraints on subsurface archaeal diversity and methanogenesis in sedimentary rock rich in organic matter.. Appl Environ Microbiol. 73(13):4171-9.
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Vrionis HA, Anderson RT, Ortiz-Bernad I, O'Neill KR, Resch CT, Peacock AD, Dayvault R, White DC, Long PE, Lovley DR.  2005.  Microbiological and geochemical heterogeneity in an in situ uranium bioremediation field site.. Appl Environ Microbiol. 71(10):6308-18.
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Tender LM, Reimers CE, Stecher HA, Holmes DE, Bond DR, Lowy DA, Pilobello K, Fertig SJ, Lovley DR.  2002.  Harnessing microbially generated power on the seafloor.. Nat Biotechnol. 20(8):821-5.
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Stults JR, Snoeyenbos-West O, Methe B, Lovley DR, Chandler DP.  2001.  Application of the 5' fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments.. Appl Environ Microbiol. 67(6):2781-9.
Stout LM, Nüsslein K.  2005.  Shifts in rhizoplane communities of aquatic plants after cadmium exposure.. Appl Environ Microbiol. 71(5):2484-92.
Stolz JF, Ellis DJ, Blum JS, Ahmann D, Lovley DR, Oremland RS.  1999.  Sulfurospirillum barnesii sp. nov. and Sulfurospirillum arsenophilum sp. nov., new members of the Sulfurospirillum clade of the epsilon Proteobacteria.. Int J Syst Bacteriol. 49 Pt 3:1177-80.
Stewart LC, Jung J-H, Kim Y-T, Kwon S-W, Park C-S, Holden JF.  2015.  Methanocaldococcus bathoardescens sp. nov., a hyperthermophilic methanogen isolated from a volcanically active deep-sea hydrothermal vent.. Int J Syst Evol Microbiol. 65(Pt 4):1280-3.
Snoeyenbos-West O, Van Praagh CG, Lovley DR.  2001.  Trichlorobacter thiogenes should be renamed as a Geobacter species.. Appl Environ Microbiol. 67(2):1020-2.
Shi S, Richardson AE, O'Callaghan M, Deangelis KM, Jones EE, Stewart A, Firestone MK, Condron LM.  2011.  Effects of selected root exudate components on soil bacterial communities.. FEMS Microbiol Ecol. 77(3):600-10.
Shelobolina ES, Nevin KP, Blakeney-Hayward JD, Johnsen CV, Plaia TW, Krader P, Woodard T, Holmes DE, Vanpraagh C G, Lovley DR.  2007.  Geobacter pickeringii sp. nov., Geobacter argillaceus sp. nov. and Pelosinus fermentans gen. nov., sp. nov., isolated from subsurface kaolin lenses.. Int J Syst Evol Microbiol. 57(Pt 1):126-35.
Shelobolina ES, Sullivan SA, O'Neill KR, Nevin KP, Lovley DR.  2004.  Isolation, characterization, and U(VI)-reducing potential of a facultatively anaerobic, acid-resistant Bacterium from Low-pH, nitrate- and U(VI)-contaminated subsurface sediment and description of Salmonella subterranea sp. nov.. Appl Environ Microbiol. 70(5):2959-65.
Shelobolina ES, Vrionis HA, Findlay RH, Lovley DR.  2008.  Geobacter uraniireducens sp. nov., isolated from subsurface sediment undergoing uranium bioremediation.. Int J Syst Evol Microbiol. 58(Pt 5):1075-8.
Sandler SJ, Hugenholtz P, Schleper C, DeLong EF, Pace NR, Clark AJ.  1999.  Diversity of radA genes from cultured and uncultured archaea: comparative analysis of putative RadA proteins and their use as a phylogenetic marker.. J Bacteriol. 181(3):907-15.
Sahu AK, Conneely T, Nüsslein K, Ergas SJ.  2009.  Hydrogenotrophic denitrification and perchlorate reduction in ion exchange brines using membrane biofilm reactors.. Biotechnol Bioeng. 104(3):483-91.
Sagaram U S, Deangelis KM, Trivedi P, Andersen GL, Lu S-E, Wang N.  2009.  Bacterial diversity analysis of Huanglongbing pathogen-infected citrus, using PhyloChip arrays and 16S rRNA gene clone library sequencing.. Appl Environ Microbiol. 75(6):1566-74.
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Rooney-Varga JN, Anderson RT, Fraga JL, Ringelberg D, Lovley DR.  1999.  Microbial communities associated with anaerobic benzene degradation in a petroleum-contaminated aquifer.. Appl Environ Microbiol. 65(7):3056-63.
Richter H, Lanthier M, Nevin KP, Lovley DR.  2007.  Lack of electricity production by Pelobacter carbinolicus indicates that the capacity for Fe(III) oxide reduction does not necessarily confer electron transfer ability to fuel cell anodes.. Appl Environ Microbiol. 73(16):5347-53.
Rich SM, Armstrong PM, Smith RD, Telford SR.  2001.  Lone star tick-infecting borreliae are most closely related to the agent of bovine borreliosis.. J Clin Microbiol. 39(2):494-7.
Rich SM, Caporale DA, Telford SR, Kocher TD, Hartl DL, Spielman A.  1995.  Distribution of the Ixodes ricinus-like ticks of eastern North America.. Proc Natl Acad Sci U S A. 92(14):6284-8.

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