Publications

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2011
Qian X, Mester T, Morgado L, Arakawa T, Sharma ML, Inoue K, Joseph C, Salgueiro CA, Maroney MJ, Lovley DR.  2011.  Biochemical characterization of purified OmcS, a c-type cytochrome required for insoluble Fe(III) reduction in Geobacter sulfurreducens.. Biochim Biophys Acta. 1807(4):404-12.
Tremblay P-L, Summers ZM, Glaven RH, Nevin KP, Zengler K, Barrett CL, Qiu Y, Palsson BO, Lovley DR.  2011.  A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution.. Environ Microbiol. 13(1):13-23.
Wilkins MJ, Callister SJ, Miletto M, Williams KH, Nicora CD, Lovley DR, Long PE, Lipton MS.  2011.  Development of a biomarker for Geobacter activity and strain composition; proteogenomic analysis of the citrate synthase protein during bioremediation of U(VI).. Microb Biotechnol. 4(1):55-63.
Fang Y, Scheibe TD, Mahadevan R, Garg S, Long PE, Lovley DR.  2011.  Direct coupling of a genome-scale microbial in silico model and a groundwater reactive transport model.. J Contam Hydrol. 122(1-4):96-103.
Strycharz SM, Glaven RH, Coppi MV, Gannon SM, Perpetua LA, Liu A, Nevin KP, Lovley DR.  2011.  Gene expression and deletion analysis of mechanisms for electron transfer from electrodes to Geobacter sulfurreducens.. Bioelectrochemistry. 80(2):142-50.
Zhuang K, Izallalen M, Mouser P, Richter H, Risso C, Mahadevan R, Lovley DR.  2011.  Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments.. ISME J. 5(2):305-16.
Lovley DR, Ueki T, Zhang T, Malvankar NS, Shrestha PM, Flanagan KA, Aklujkar M, Butler JE, Giloteaux L, Rotaru A-E et al..  2011.  Geobacter: the microbe electric's physiology, ecology, and practical applications.. Adv Microb Physiol. 59:1-100.
Mahadevan R, Palsson BØ, Lovley DR.  2011.  In situ to in silico and back: elucidating the physiology and ecology of Geobacter spp. using genome-scale modelling.. Nat Rev Microbiol. 9(1):39-50.
Yun J, Ueki T, Miletto M, Lovley DR.  2011.  Monitoring the metabolic status of geobacter species in contaminated groundwater by quantifying key metabolic proteins with Geobacter-specific antibodies.. Appl Environ Microbiol. 77(13):4597-602.
Malvankar NS, Vargas M, Nevin KP, Franks AE, Leang C, Kim B-C, Inoue K, Mester T, Covalla SF, Johnson JP et al..  2011.  Tunable metallic-like conductivity in microbial nanowire networks.. Nat Nanotechnol. 6(9):573-9.
2010
Leang C, Qian X, Mester T, Lovley DR.  2010.  Alignment of the c-type cytochrome OmcS along pili of Geobacter sulfurreducens.. Appl Environ Microbiol. 76(12):4080-4.
Nagarajan H, Butler JE, Klimes A, Qiu Y, Zengler K, Ward J, Young ND, Methé BA, Palsson BØ, Lovley DR et al..  2010.  De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads.. PLoS One. 5(6):e10922.
Summers ZM, Fogarty HE, Leang C, Franks AE, Malvankar NS, Lovley DR.  2010.  Direct exchange of electrons within aggregates of an evolved syntrophic coculture of anaerobic bacteria.. Science. 330(6009):1413-5.
Williams KH, Nevin KP, Franks A, Englert A, Long PE, Lovley DR.  2010.  Electrode-based approach for monitoring in situ microbial activity during subsurface bioremediation.. Environ Sci Technol. 44(1):47-54.
Butler JE, Young ND, Lovley DR.  2010.  Evolution of electron transfer out of the cell: comparative genomics of six Geobacter genomes.. BMC Genomics. 11:40.
Elifantz H, N'guessan LA, Mouser PJ, Williams KH, Wilkins MJ, Risso C, Holmes DE, Long PE, Lovley DR.  2010.  Expression of acetate permease-like (apl ) genes in subsurface communities of Geobacter species under fluctuating acetate concentrations.. FEMS Microbiol Ecol. 73(3):441-9.
Aklujkar M, Young ND, Holmes D, Chavan M, Risso C, Kiss HE, Han CS, Land ML, Lovley DR.  2010.  The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environments.. BMC Genomics. 11:490.
Ueki T, Lovley DR.  2010.  Genome-wide gene regulation of biosynthesis and energy generation by a novel transcriptional repressor in Geobacter species.. Nucleic Acids Res. 38(3):810-21.
Krushkal J, Juárez K, Barbe JF, Qu Y, Andrade A, Puljic M, Adkins RM, Lovley DR, Ueki T.  2010.  Genome-wide survey for PilR recognition sites of the metal-reducing prokaryote Geobacter sulfurreducens.. Gene. 469(1-2):31-44.
Yang T H, Coppi MV, Lovley DR, Sun J.  2010.  Metabolic response of Geobacter sulfurreducens towards electron donor/acceptor variation.. Microb Cell Fact. 9:90.
Franks AE, Nevin KP, Glaven RH, Lovley DR.  2010.  Microtoming coupled to microarray analysis to evaluate the spatial metabolic status of Geobacter sulfurreducens biofilms.. ISME J. 4(4):509-19.
Zhao J, Fang Y, Scheibe TD, Lovley DR, Mahadevan R.  2010.  Modeling and sensitivity analysis of electron capacitance for Geobacter in sedimentary environments.. J Contam Hydrol. 112(1-4):30-44.

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