Publications

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Aklujkar M, Haveman SA, DiDonato R, Chertkov O, Han CS, Land ML, Brown P, Lovley DR.  2012.  The genome of Pelobacter carbinolicus reveals surprising metabolic capabilities and physiological features.. BMC Genomics. 13:690.
Krushkal J, Yan B, DiDonato LN, Puljic M, Nevin KP, Woodard TL, Adkins RM, Methé BA, Lovley DR.  2007.  Genome-wide expression profiling in Geobacter sulfurreducens: identification of Fur and RpoS transcription regulatory sites in a relGsu mutant.. Funct Integr Genomics. 7(3):229-55.
Ueki T, Lovley DR.  2010.  Genome-wide gene regulation of biosynthesis and energy generation by a novel transcriptional repressor in Geobacter species.. Nucleic Acids Res. 38(3):810-21.
Krushkal J, Juárez K, Barbe JF, Qu Y, Andrade A, Puljic M, Adkins RM, Lovley DR, Ueki T.  2010.  Genome-wide survey for PilR recognition sites of the metal-reducing prokaryote Geobacter sulfurreducens.. Gene. 469(1-2):31-44.
Caccavo F, Lonergan DJ, Lovley DR, Davis M, Stolz JF, McInerney MJ.  1994.  Geobacter sulfurreducens sp. nov., a hydrogen- and acetate-oxidizing dissimilatory metal-reducing microorganism.. Appl Environ Microbiol. 60(10):3752-9.
Qu Y, Brown P, Barbe JF, Puljic M, Merino E, Adkins RM, Lovley DR, Krushkal J.  2009.  GSEL version 2, an online genome-wide query system of operon organization and regulatory sequence elements of Geobacter sulfurreducens.. OMICS. 13(5):439-49.
H
Ueki T, Lovley DR.  2007.  Heat-shock sigma factor RpoH from Geobacter sulfurreducens.. Microbiology. 153(Pt 3):838-46.
Rich SM, Rosenthal BM, Telford SR, Spielman A, Hartl DL, Ayala FJ.  1997.  Heterogeneity of the internal transcribed spacer (ITS-2) region within individual deer ticks.. Insect Mol Biol. 6(2):123-9.
I
Burand JP, Kim W, Welch A, Elkinton JS.  2011.  Identification of a nucleopolyhedrovirus in winter moth populations from Massachusetts.. J Invertebr Pathol. 108(3):217-9.
Wood TI, Griffith KL, Fawcett WP, Jair KW, Schneider TD, Wolf RE.  1999.  Interdependence of the position and orientation of SoxS binding sites in the transcriptional activation of the class I subset of Escherichia coli superoxide-inducible promoters.. Mol Microbiol. 34(3):414-30.
Aklujkar M, Lovley DR.  2010.  Interference with histidyl-tRNA synthetase by a CRISPR spacer sequence as a factor in the evolution of Pelobacter carbinolicus.. BMC Evol Biol. 10:230.
Coates JD, Phillips EJ, Lonergan DJ, Jenter H, Lovley DR.  1996.  Isolation of Geobacter species from diverse sedimentary environments.. Appl Environ Microbiol. 62(5):1531-6.
M
Holmes DE, Bond DR, O'Neil RA, Reimers CE, Tender LR, Lovley DR.  2004.  Microbial communities associated with electrodes harvesting electricity from a variety of aquatic sediments.. Microb Ecol. 48(2):178-90.
Blanar MA, Sandler SJ, Armengod ME, Ream LW, Clark AJ.  1984.  Molecular analysis of the recF gene of Escherichia coli.. Proc Natl Acad Sci U S A. 81(15):4622-6.
Boyd EF, Hill CW, Rich SM, Hartl DL.  1996.  Mosaic structure of plasmids from natural populations of Escherichia coli.. Genetics. 143(3):1091-100.
Sandler SJ.  2000.  Multiple genetic pathways for restarting DNA replication forks in Escherichia coli K-12.. Genetics. 155(2):487-97.
Sandler SJ, Clark AJ.  1994.  Mutational analysis of sequences in the recF gene of Escherichia coli K-12 that affect expression.. J Bacteriol. 176(13):4011-6.
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Armstrong PM, Rich SM, Smith RD, Hartl DL, Spielman A, Telford SR.  1996.  A new Borrelia infecting Lone Star ticks.. Lancet. 347(8993):67-8.
Afkar E, Reguera G, Schiffer M, Lovley DR.  2005.  A novel Geobacteraceae-specific outer membrane protein J (OmpJ) is essential for electron transport to Fe(III) and Mn(IV) oxides in Geobacter sulfurreducens.. BMC Microbiol. 5:41.
O
Rich SM, Ferreira MU, Ayala FJ.  2000.  The origin of antigenic diversity in Plasmodium falciparum.. Parasitol Today. 16(9):390-6.
Mehta T, Coppi MV, Childers SE, Lovley DR.  2005.  Outer membrane c-type cytochromes required for Fe(III) and Mn(IV) oxide reduction in Geobacter sulfurreducens.. Appl Environ Microbiol. 71(12):8634-41.
P
Lonergan DJ, Jenter HL, Coates JD, Phillips EJ, Schmidt TM, Lovley DR.  1996.  Phylogenetic analysis of dissimilatory Fe(III)-reducing bacteria.. J Bacteriol. 178(8):2402-8.
Rich SM, Ayala FJ.  2000.  Population structure and recent evolution of Plasmodium falciparum.. Proc Natl Acad Sci U S A. 97(13):6994-7001.
Griffith KL, Shah IM, Wolf RE.  2004.  Proteolytic degradation of Escherichia coli transcription activators SoxS and MarA as the mechanism for reversing the induction of the superoxide (SoxRS) and multiple antibiotic resistance (Mar) regulons.. Mol Microbiol. 51(6):1801-16.
R
Sandler SJ, Satin LH, Samra HS, Clark AJ.  1996.  recA-like genes from three archaean species with putative protein products similar to Rad51 and Dmc1 proteins of the yeast Saccharomyces cerevisiae.. Nucleic Acids Res. 24(11):2125-32.

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