Publications

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Yennaco LJ, Hu Y, Holden JF.  2007.  Characterization of malate dehydrogenase from the hyperthermophilic archaeon Pyrobaculum islandicum.. Extremophiles. 11(5):741-6.
Mahadevan R, Bond DR, Butler JE, Esteve-Nuñez A, Coppi MV, Palsson BO, Schilling CH, Lovley DR.  2006.  Characterization of metabolism in the Fe(III)-reducing organism Geobacter sulfurreducens by constraint-based modeling.. Appl Environ Microbiol. 72(2):1558-68.
Griffith KL, Becker SM, Wolf RE.  2005.  Characterization of TetD as a transcriptional activator of a subset of genes of the Escherichia coli SoxS/MarA/Rob regulon.. Mol Microbiol. 56(4):1103-17.
Nüsslein K, Tiedje JM.  1998.  Characterization of the dominant and rare members of a young Hawaiian soil bacterial community with small-subunit ribosomal DNA amplified from DNA fractionated on the basis of its guanine and cytosine composition.. Appl Environ Microbiol. 64(4):1283-9.
Deangelis KM, Allgaier M, Chavarria Y, Fortney JL, Hugenholtz P, Simmons B, Sublette K, Silver WL, Hazen TC.  2011.  Characterization of trapped lignin-degrading microbes in tropical forest soil.. PLoS One. 6(4):e19306.
Rothermich MM, Guerrero R, Lenz RW, Goodwin S.  2000.  Characterization, seasonal occurrence, and diel fluctuation of poly(hydroxyalkanoate) in photosynthetic microbial mats.. Appl Environ Microbiol. 66(10):4279-91.
Mahadevan R, Yan B, Postier B, Nevin KP, Woodard TL, O'Neil R, Coppi MV, Methé BA, Krushkal J.  2008.  Characterizing regulation of metabolism in Geobacter sulfurreducens through genome-wide expression data and sequence analysis.. OMICS. 12(1):33-59.
Weitzman PD, Danson MJ.  1976.  Citrate synthase.. Curr Top Cell Regul. 10:161-204.
Hu Y, Holden JF.  2006.  Citric acid cycle in the hyperthermophilic archaeon Pyrobaculum islandicum grown autotrophically, heterotrophically, and mixotrophically with acetate.. J Bacteriol. 188(12):4350-5.
Breau WC, Atwood WJ, Norkin LC.  1992.  Class I major histocompatibility proteins are an essential component of the simian virus 40 receptor.. J Virol. 66(4):2037-45.
Lovley DR.  2003.  Cleaning up with genomics: applying molecular biology to bioremediation.. Nat Rev Microbiol. 1(1):35-44.
Sandler SJI, Figaji AA, Adelson DP.  2010.  Clinical applications of biomarkers in pediatric traumatic brain injury.. Childs Nerv Syst. 26(2):205-13.
Klingbeil MM, Englund PT.  2004.  Closing the gaps in kinetoplast DNA network replication.. Proc Natl Acad Sci U S A. 101(13):4333-4.
Patel KK, Salva PS, Webley WC.  2011.  Colonization of paediatric lower respiratory tract with genital Mycoplasma species.. Respirology. 16(7):1081-7.
Elkhaimi M, Kaadige MR, Kamath D, Jackson JC, Biliran H, Lopes JM.  2000.  Combinatorial regulation of phospholipid biosynthetic gene expression by the UME6, SIN3 and RPD3 genes.. Nucleic Acids Res. 28(16):3160-7.
Anderson RT, Chapelle FH, Lovley DR.  2001.  Comment on "Abiotic controls on H2 production from basalt-water reactions and implications for aquifer biogeochemistry".. Environ Sci Technol. 35(7):1556-9.
Neveu G, Cassonnet P, Vidalain P-O, Rolloy C, Mendoza J, Jones L, Tangy F, Muller M, Demeret C, Tafforeau L et al..  2012.  Comparative analysis of virus–host interactomes with a mammalian high-throughput protein complementation assay based on Gaussia princeps luciferase. Methods. 58:349–359.
Muller M, Cassonnet P, Favre M, Jacob Y, Demeret C.  2013.  A Comparative Approach to Characterize the Landscape of Host-Pathogen Protein-Protein Interactions. Journal of Visualized Experiments.
Gomez-Alvarez V, King GM, Nüsslein K.  2007.  Comparative bacterial diversity in recent Hawaiian volcanic deposits of different ages.. FEMS Microbiol Ecol. 60(1):60-73.
Tran HT, Krushkal J, Antommattei FM, Lovley DR, Weis RM.  2008.  Comparative genomics of Geobacter chemotaxis genes reveals diverse signaling function.. BMC Genomics. 9:471.
Zhang S, Kamachi M, Takagi Y, Lenz RW, Goodwin S.  2001.  Comparative study of the relationship between monomer structure and reactivity for two polyhydroxyalkanoate synthases.. Appl Microbiol Biotechnol. 56(1-2):131-6.
Moroi K, Sato T.  1975.  Comparison between procaine and isocarboxazid metabolism in vitro by a liver microsomal amidase-esterase.. Biochem Pharmacol. 24(16):1517-21.
Holmes DE, Nevin KP, Lovley DR.  2004.  Comparison of 16S rRNA, nifD, recA, gyrB, rpoB and fusA genes within the family Geobacteraceae fam. nov.. Int J Syst Evol Microbiol. 54(Pt 5):1591-9.
Gabriel GJ, Maegerlein JA, Nelson CF, Dabkowski JM, Eren T, Nüsslein K, Tew GN.  2009.  Comparison of facially amphiphilic versus segregated monomers in the design of antibacterial copolymers.. Chemistry. 15(2):433-9.
Tarentino AL, Maley F.  1975.  A comparison of the substrate specificities of endo-beta-N-acetylglucosaminidases from Streptomyces griseus and Diplococcus Pneumoniae.. Biochem Biophys Res Commun. 67(1):455-62.

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