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Coppi MV, O'Neil RA, Lovley DR.  2004.  Identification of an uptake hydrogenase required for hydrogen-dependent reduction of Fe(III) and other electron acceptors by Geobacter sulfurreducens.. J Bacteriol. 186(10):3022-8.
Cord-Ruwisch R, Lovley DR, Schink B.  1998.  Growth of geobacter sulfurreducens with acetate in syntrophic cooperation with hydrogen-oxidizing anaerobic partners. Appl Environ Microbiol. 64(6):2232-6.
Cox MM, Goodman MF, Kreuzer KN, Sherratt DJ, Sandler SJ, Marians KJ.  2000.  The importance of repairing stalled replication forks.. Nature. 404(6773):37-41.
Craig SA, Holden JF, Khaled MY, Craig SA, Holden JF, Khaled MY.  2000.  Determination of polydextrose as dietary fiber in foods.. J AOAC Int. 83(4):1006-12.
Craig SA, Holden JF, Khaled MY.  2001.  Determination of polydextrose in foods by ion chromatography: collaborative study.. J AOAC Int. 84(2):472-8.
Crellin PK, Kovacevic S, Martin KL, Brammananth R, Morita YS, Billman-Jacobe H, McConville MJ, Coppel RL.  2008.  Mutations in pimE restore lipoarabinomannan synthesis and growth in a Mycobacterium smegmatis lpqW mutant.. J Bacteriol. 190(10):3690-9.
Cummings DE, Snoeyenbos-West OL, Newby DT, Niggemyer AM, Lovley DR, Achenbach LA, Rosenzweig RF.  2003.  Diversity of Geobacteraceae species inhabiting metal-polluted freshwater lake sediments ascertained by 16S rDNA analyses.. Microb Ecol. 46(2):257-69.
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Dangoria NS, Breau WC, Anderson HA, Cishek DM, Norkin LC.  1996.  Extracellular simian virus 40 induces an ERK/MAP kinase-independent signalling pathway that activates primary response genes and promotes virus entry.. J Gen Virol. 77 ( Pt 9):2173-82.
Daniels R, Rusan NM, Wilbuer A-K, Norkin LC, Wadsworth P, Hebert DN.  2006.  Simian virus 40 late proteins possess lytic properties that render them capable of permeabilizing cellular membranes.. J Virol. 80(13):6575-87.
de la Salmonière Y-OLuc Goguet, Kim CC, Tsolaki AG, Pym AS, Siegrist MS, Small PM.  2004.  High-throughput method for detecting genomic-deletion polymorphisms.. J Clin Microbiol. 42(7):2913-8.
Deangelis KM, D'haeseleer P, Chivian D, Fortney JL, Khudyakov J, Simmons B, Woo H, Arkin AP, Davenport K W, Goodwin L et al..  2011.  Complete genome sequence of "Enterobacter lignolyticus" SCF1.. Stand Genomic Sci. 5(1):69-85.
Deangelis KM, Allgaier M, Chavarria Y, Fortney JL, Hugenholtz P, Simmons B, Sublette K, Silver WL, Hazen TC.  2011.  Characterization of trapped lignin-degrading microbes in tropical forest soil.. PLoS One. 6(4):e19306.
Deangelis KM, Sharma D, Varney R, Simmons B, Isern NG, Markilllie LM, Nicora C, Norbeck AD, Taylor RC, Aldrich JT et al..  2013.  Evidence supporting dissimilatory and assimilatory lignin degradation in Enterobacter lignolyticus SCF1.. Front Microbiol. 4:280.
Deangelis KM, Firestone MK.  2012.  Phylogenetic clustering of soil microbial communities by 16S rRNA but not 16S rRNA genes.. Appl Environ Microbiol. 78(7):2459-61.
Deangelis KM, Brodie EL, DeSantis TZ, Andersen GL, Lindow SE, Firestone MK.  2009.  Selective progressive response of soil microbial community to wild oat roots.. ISME J. 3(2):168-78.
Deangelis KM, Wu CH, Beller HR, Brodie EL, Chakraborty R, DeSantis TZ, Fortney JL, Hazen TC, Osman SR, Singer ME et al..  2011.  PCR amplification-independent methods for detection of microbial communities by the high-density microarray PhyloChip.. Appl Environ Microbiol. 77(18):6313-22.
DeAngelis KM, Chivian D, Fortney J, Simmons BA, Hazen TC, Silver WL.  2013.  Changes in microbial dynamics during long-term decomposition in tropical forests.. Soil Biology and Biochemistry. 66:60-68.
Deangelis KM, Fortney JL, Borglin S, Silver WL, Simmons BA, Hazen TC.  2012.  Anaerobic decomposition of switchgrass by tropical soil-derived feedstock-adapted consortia.. MBio. 3(1)
Deangelis KM, D'haeseleer P, Chivian D, Simmons B, Arkin AP, Mavromatis K, Malfatti S, Tringe S, Hazen TC.  2013.  Metagenomes of tropical soil-derived anaerobic switchgrass-adapted consortia with and without iron.. Stand Genomic Sci. 7(3):382-98.
DeAngelis KM, Pold G, Topcuoglu B, van Diepen L, Blanchard J, Melillo J, Frey S.  2015.  Long-term warming drives loss of dominant taxa and rRNA copy number among soil bacteria.. Frontiers in Microbiology.
Deangelis KM, Silver WL, Thompson AW, Firestone MK.  2010.  Microbial communities acclimate to recurring changes in soil redox potential status.. Environ Microbiol. 12(12):3137-49.
Diao Y, Rodriguez V, Klingbeil M, Arsuaga J.  2015.  Orientation of DNA Minicircles Balances Density and Topological Complexity in Kinetoplast DNA.. PLoS One. 10(6):e0130998.
DiDonato LN, Sullivan SA, Methé BA, Nevin KP, England R, Lovley DR.  2006.  Role of RelGsu in stress response and Fe(III) reduction in Geobacter sulfurreducens.. J Bacteriol. 188(24):8469-78.
Ding Y-HR, Hixson KK, Aklujkar MA, Lipton MS, Smith RD, Lovley DR, Mester T.  2008.  Proteome of Geobacter sulfurreducens grown with Fe(III) oxide or Fe(III) citrate as the electron acceptor.. Biochim Biophys Acta. 1784(12):1935-41.
Ding Y-HR, Hixson KK, Giometti CS, Stanley A, Esteve-Núñez A, Khare T, Tollaksen SL, Zhu W, Adkins JN, Lipton MS et al..  2006.  The proteome of dissimilatory metal-reducing microorganism Geobacter sulfurreducens under various growth conditions.. Biochim Biophys Acta. 1764(7):1198-206.

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