Publications

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2006

Yan B, Núñez C, Ueki T, Esteve-Núñez A, Puljic M, Adkins RM, Methé BA, Lovley DR, Krushkal J. 2006. Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information.. Gene. 384:73-95.

2007

Ueki T, Lovley DR. 2007. Heat-shock sigma factor RpoH from Geobacter sulfurreducens.. Microbiology. 153(Pt 3):838-46.

2009

Leang C, Krushkal J, Ueki T, Puljic M, Sun J, Juárez K, Núñez C, Reguera G, DiDonato R, Postier B et al.. 2009. Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens.. BMC Genomics. 10:331.

2010

Ueki T, Lovley DR. 2010. Genome-wide gene regulation of biosynthesis and energy generation by a novel transcriptional repressor in Geobacter species.. Nucleic Acids Res. 38(3):810-21.

Krushkal J, Juárez K, Barbe JF, Qu Y, Andrade A, Puljic M, Adkins RM, Lovley DR, Ueki T. 2010. Genome-wide survey for PilR recognition sites of the metal-reducing prokaryote Geobacter sulfurreducens.. Gene. 469(1-2):31-44.

Ueki T, Lovley DR. 2010. Novel regulatory cascades controlling expression of nitrogen-fixation genes in Geobacter sulfurreducens.. Nucleic Acids Res. 38(21):7485-99.

2011

Lovley DR, Ueki T, Zhang T, Malvankar NS, Shrestha PM, Flanagan KA, Aklujkar M, Butler JE, Giloteaux L, Rotaru A-E et al.. 2011. Geobacter: the microbe electric's physiology, ecology, and practical applications.. Adv Microb Physiol. 59:1-100.

Yun J, Ueki T, Miletto M, Lovley DR. 2011. Monitoring the metabolic status of geobacter species in contaminated groundwater by quantifying key metabolic proteins with Geobacter-specific antibodies.. Appl Environ Microbiol. 77(13):4597-602.

2012

Ueki T, Leang C, Inoue K, Lovley DR. 2012. Identification of multicomponent histidine-aspartate phosphorelay system controlling flagellar and motility gene expression in Geobacter species.. J Biol Chem. 287(14):10958-66.

Rotaru A-E, Shrestha PM, Liu F, Ueki T, Nevin K, Summers ZM, Lovley DR. 2012. Interspecies electron transfer via hydrogen and formate rather than direct electrical connections in cocultures of Pelobacter carbinolicus and Geobacter sulfurreducens.. Appl Environ Microbiol. 78(21):7645-51.

Summers ZM, Ueki T, Ismail W, Haveman SA, Lovley DR. 2012. Laboratory evolution of Geobacter sulfurreducens for enhanced growth on lactate via a single-base-pair substitution in a transcriptional regulator.. ISME J. 6(5):975-83.

2013

Leang C, Ueki T, Nevin KP, Lovley DR. 2013. A genetic system for Clostridium ljungdahlii: a chassis for autotrophic production of biocommodities and a model homoacetogen.. Appl Environ Microbiol. 79(4):1102-9.

2014

Ueki T, Nevin KP, Woodard TL, Lovley DR. 2014. Converting carbon dioxide to butyrate with an engineered strain of Clostridium ljungdahlii.. mBio. 5(5):e01636-14.

Banerjee A, Leang C, Ueki T, Nevin KP, Lovley DR. 2014. Lactose-inducible system for metabolic engineering of Clostridium ljungdahlii.. Appl Environ Microbiol. 80(8):2410-6.

2016

Yun J, Malvankar NS, Ueki T, Lovley DR. 2016. Functional environmental proteomics: elucidating the role of a c-type cytochrome abundant during uranium bioremediation.. ISME J. 10(2):310-20.

Ueki T, Nevin KP, Woodard TL, Lovley DR. 2016. Genetic switches and related tools for controlling gene expression and electrical outputs of Geobacter sulfurreducens.. J Ind Microbiol Biotechnol. 43(11):1561-1575.

2017

Ueki T, DiDonato LN, Lovley DR. 2017. Toward establishing minimum requirements for extracellular electron transfer in Geobacter sulfurreducens.. FEMS Microbiol Lett. 364(9)

2018

Ueki T, Nevin KP, Woodard TL, Aklujkar MA, Holmes DE, Lovley DR. 2018. Construction of a Strain With Exceptional Growth on Cathodes.. Front Microbiol. 9:1512.

Holmes DE, Rotaru A-E, Ueki T, Shrestha PM, Ferry JG, Lovley DR. 2018. Electron and Proton Flux for Carbon Dioxide Reduction in During Direct Interspecies Electron Transfer.. Front Microbiol. 9:3109.

Ueki T, Nevin KP, Rotaru A-E, Wang L-Y, Ward JE, Woodard TL, Lovley DR. 2018. Strains Expressing Poorly Conductive Pili Reveal Constraints on Direct Interspecies Electron Transfer Mechanisms.. mBio. 9(4)

2019

Ueki T, Walker DJF, Tremblay P-L, Nevin KP, Ward JE, Woodard TL, Nonnenmann SS, Lovley DR. 2019. Decorating the Outer Surface of Microbially Produced Protein Nanowires with Peptides.. ACS Synth Biol. 8(8):1809-1817.

Tang H-Y, Holmes DE, Ueki T, Palacios PA, Lovley DR. 2019. Iron Corrosion via Direct Metal-Microbe Electron Transfer.. mBio. 10(3)

Holmes DE, Ueki T, Tang H-Y, Zhou J, Smith JA, Chaput G, Lovley DR. 2019. A Membrane-Bound Cytochrome Enables To Conserve Energy from Extracellular Electron Transfer.. mBio. 10(4)

2020

Ueki T, Walker DJF, Woodard TL, Nevin KP, Nonnenmann SS, Lovley DR. 2020. An Chassis for Production of Electrically Conductive Protein Nanowires.. ACS Synth Biol. 9(3):647-654.

Walker DJF, Nevin KP, Holmes DE, Rotaru A-E, Ward JE, Woodard TL, Zhu J, Ueki T, Nonnenmann SS, McInerney MJ et al.. 2020. Syntrophus conductive pili demonstrate that common hydrogen-donating syntrophs can have a direct electron transfer option.. ISME J. 14(3):837-846.

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